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In this last issue before the summer break we share the new release of HADDOCK and highlight two integrative modelling publications from our partner, University of Utrecht. We have finalised the programme for the upcoming 3rd BioExcel Conference on Advances in Biomolecular Simulations but you can still join us and present your work. Our yearly survey (shorter than usual) is about to close so please provide your feedback and help guide the future development of BioExcel. Read on for this and more!
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Wishing you happy summer holidays,
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HADDOCK3 version 2026.5 has been released with the (re)introduction of the Martini coarse-grained model in HADDOCK as one of the main new features. This is described in the following pre-print:
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In this new release, HADDOCK3 workflows can now seamlessly operate in all-atom and coarse-grained mode, with new modules added to transform from all-atom to coarse-grained representations and vice-versa.
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Benchmarks, new tutorials, new workflows, code usage in research:
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Programme finalised!
We have finalised the programme for our 3rd BioExcel Conference on Advances in Biomolecular Simulations taking place in Brno, Czech Republic from 27 to 30 September 2026.
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- With >30 invited and selected speakers and >100 registered participants to date, you are still in time to join us.
- Submit your abstract and present your work as a poster.
- See live demos and learn more about our core codes from the experts who will be present at our BioExcel booth during the conference.
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Registration closes on 31 August 2026 with full instructions on registration and abstract submission on the conference webpage.
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BioExcel survey 2026 closes soon!
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Feedback from our users and community members is very important to us.
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The BioExcel survey 2026 gives you the opportunity to help guide our software development, support and training. This year the survey is shorter and we have included some questions on the impact of AI on biomolecular simulations and a dedicated (optional) section for industry users.
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We really appreciate you taking the time to complete the survey and share your views before the 30th of June!
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Ambassador Program workshop: Baltic edition
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Hurry, registration closes on 30 June 2026!
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The Baltic edition Ambassador Program workshop will take place in Gliwice, Poland from 8 to 9 of September and will focus on the use of GROMACS, PMX and BioBB.
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Ambassador Program workshops: Aegean edition
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The Aegean edition workshop will take place in Athens, Greece from 18 to 20 November and will focus on the use of GROMACS, HADDOCK and BioBB. Registration opens on 10 July 2026!
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BioExcel Building Blocks are part of the new MD4SB project
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Request: please acknowledge BioExcel support
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We are passionate about providing high quality support to users of our codes and have done so for many years. We have a small favour to ask those who have received this support and read this message.
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Please take a moment to acknowledge the BioExcel Centre of Excellence as part of your dissemination through journals, presentations or other forms of communication. It would mean the world to us! Further, we would be delighted if you could drop us a quick email at team@bioexcel.eu to let us know how we have helped you. Thank you for your continued support!
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